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  5. Bra013007

Bra013007 (GSM1, MAM1, IMS3)


Aliases : GSM1, MAM1, IMS3

Description : methylthioalkylmalate synthase. EC_2.3 acyltransferase


Gene families : OG0000303 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra013007
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_46


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004363 glutathione synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004834 tryptophan synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005542 folic acid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006568 tryptophan metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006586 indolalkylamine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006750 glutathione biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006771 riboflavin metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009231 riboflavin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009349 riboflavin synthase complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016881 acid-amino acid ligase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031406 carboxylic acid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042430 indole-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042726 flavin-containing compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042727 flavin-containing compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043177 organic acid binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0072341 modified amino acid binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:1904091 non-ribosomal peptide synthetase activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000891 PYR_CT 1524 1804
No external refs found!