1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra000129

Bra000129 (JAL22)


Aliases : JAL22

Description : not classified


Gene families : OG0002768 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002768_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra000129
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Bra005053 JAL22 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008061 chitin binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008200 ion channel inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016247 channel regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016248 channel inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0017080 sodium channel regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019871 sodium channel inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051920 peroxiredoxin activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Brassica rapa GO terms from Neighborhoods
MF GO:0098772 molecular function regulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0099106 ion channel regulator activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140678 molecular function inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 16 153
IPR001229 Jacalin-like_lectin_dom 320 449
IPR001229 Jacalin-like_lectin_dom 175 305
No external refs found!