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  5. Bra012920

Bra012920


Description : not classified


Gene families : OG0003088 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra012920
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_256


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0008303 caspase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008318 protein prenyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015020 glucuronosyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016255 attachment of GPI anchor to protein IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Brassica rapa GO terms from Neighborhoods
BP GO:0018342 protein prenylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0042765 GPI-anchor transamidase complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Brassica rapa GO terms from Neighborhoods
BP GO:0097354 prenylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046848 E_motif 663 725
IPR002885 Pentatricopeptide_rpt 159 188
IPR002885 Pentatricopeptide_rpt 451 474
IPR002885 Pentatricopeptide_rpt 623 644
IPR002885 Pentatricopeptide_rpt 551 600
IPR002885 Pentatricopeptide_rpt 351 394
IPR002885 Pentatricopeptide_rpt 122 151
No external refs found!