Mp6g07170.1 (PAT2, WAT1, AP-3 beta)

Aliases : PAT2, WAT1, AP-3 beta

Description : large subunit beta of AP-3 Golgi to vacuole cargo adaptor complex

Gene families : OG0057783 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp6g07170.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_75

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0001727	lipid kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003852	2-isopropylmalate synthase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004143	ATP-dependent diacylglycerol kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004518	nuclease activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004527	exonuclease activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004673	protein histidine kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006400	tRNA modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006551	leucine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008408	3'-5' exonuclease activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009098	leucine biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009893	positive regulation of metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016042	lipid catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016755	aminoacyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032784	regulation of DNA-templated transcription elongation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032786	positive regulation of DNA-templated transcription, elongation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032968	positive regulation of transcription elongation by RNA polymerase II	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034227	tRNA thio-modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034243	regulation of transcription elongation by RNA polymerase II	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0034450	ubiquitin-ubiquitin ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043687	post-translational protein modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0048522	positive regulation of cellular process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0050789	regulation of biological process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0050794	regulation of cellular process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0065007	biological regulation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140299	small molecule sensor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002553	Clathrin/coatomer_adapt-like_N	38	499
IPR002553	Clathrin/coatomer_adapt-like_N	536	675
IPR029390	AP3B_C	962	1044

External Links

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Mp6g07170.1 (PAT2, WAT1, AP-3 beta)

Expression Profile

Co-expression Networks

Functional Annotation