Mp6g02800.1

Description : tRNA dihydrouridine synthase

Gene families : OG0057457 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp6g02800.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_116

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEA	Interproscan
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0106413	RNA dihydrouridine synthase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003735	structural constituent of ribosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003872	6-phosphofructokinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004222	metalloendopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0005991	trehalose metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0005992	trehalose biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006082	organic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006534	cysteine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006553	lysine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006694	steroid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006873	intracellular monoatomic ion homeostasis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006879	intracellular iron ion homeostasis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008199	ferric iron binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008202	steroid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008237	metallopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008443	phosphofructokinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009069	serine family amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009085	lysine biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009092	homoserine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0017004	cytochrome complex assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019200	carbohydrate kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019346	transsulfuration	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019725	cellular homeostasis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019752	carboxylic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019842	vitamin binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0030003	intracellular monoatomic cation homeostasis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030170	pyridoxal phosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042592	homeostatic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043436	oxoacid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043603	amide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046351	disaccharide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046451	diaminopimelate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0048878	chemical homeostasis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0050667	homocysteine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0050801	monoatomic ion homeostasis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0055080	monoatomic cation homeostasis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0055082	intracellular chemical homeostasis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0070279	vitamin B6 binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0098771	inorganic ion homeostasis	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001269	DUS_fam	10	285

External Links

No external refs found!

Mp6g02800.1

Expression Profile

Co-expression Networks

Functional Annotation