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  5. Mp6g01650.1

Mp6g01650.1 (CP24, LHCB6)


Aliases : CP24, LHCB6

Description : component *(LHCb6) of LHC-II complex


Gene families : OG0002156 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp6g01650.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Bra026099 CP24, LHCB6 component *(LHCb6) of LHC-II complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_5_107040.1 CP24, LHCB6 component *(LHCb6) of LHC-II complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_117441.1 CP24, LHCB6 component *(LHCb6) of LHC-II complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004356 glutamine synthetase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004418 hydroxymethylbilane synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006412 translation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006542 glutamine biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009522 photosystem I IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009536 plastid IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009538 photosystem I reaction center IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010109 regulation of photosynthesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0010242 oxygen evolving activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015994 chlorophyll metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015995 chlorophyll biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016211 ammonia ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042548 regulation of photosynthesis, light reaction IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042549 photosystem II stabilization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043226 organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046148 pigment biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 81 257
No external refs found!