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  5. Bra001279

Bra001279 (QRT2)


Aliases : QRT2

Description : polygalacturonase *(QRT2). EC_3.2 glycosylase


Gene families : OG0010622 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra001279
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_163


Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004857 enzyme inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005991 trehalose metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005992 trehalose biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0010333 terpene synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140678 molecular function inhibitor activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 94 427
No external refs found!