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Aliases : PWR
Description : component *(PWR) of HDA9-PWR deacetylation complex
Gene families : OG0014955 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra012815 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_119 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003712 | transcription coregulator activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006401 | RNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006402 | mRNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006886 | intracellular protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016197 | endosomal transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016482 | cytosolic transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016567 | protein ubiquitination | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0016592 | mediator complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016746 | acyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030118 | clathrin coat | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030125 | clathrin vesicle coat | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030132 | clathrin coat of coated pit | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0030906 | retromer, cargo-selective complex | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0031011 | Ino80 complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042393 | histone binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0097346 | INO80-type complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:1904949 | ATPase complex | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 1129 | 1170 |
| No external refs found! |