Bra012779 (AtCLA1, DXS, CLA,...)

Aliases : AtCLA1, DXS, CLA, DXPS2, DXS1, DEF, CLA1

Description : 1-deoxy-D-xylulose 5-phosphate synthase *(DXS). EC_2.2 transferase transferring aldehyde or ketonic group

Gene families : OG0003194 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003194_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra012779
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_55

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016744	transketolase or transaldolase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004602	glutathione peroxidase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0005996	monosaccharide metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006260	DNA replication	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019321	pentose metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019566	arabinose metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0019898	extrinsic component of membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046373	L-arabinose metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0110102	ribulose bisphosphate carboxylase complex assembly	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005477	Dxylulose-5-P_synthase	76	358
IPR033248	Transketolase_C	545	668
IPR005475	Transketolase-like_Pyr-bd	448	527

External Links

No external refs found!