Mp5g09880.1 (ISPH, CLB6, HDR)

Aliases : ISPH, CLB6, HDR

Description : 4-hydroxy-3-methylbut-2-enyl diphosphate reductase

Gene families : OG0056167 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp5g09880.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_72

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	None	Extended
MF	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor	None	Extended
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046490	isopentenyl diphosphate metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan
BP	GO:0050992	dimethylallyl diphosphate biosynthetic process	IEA	Interproscan
BP	GO:0050993	dimethylallyl diphosphate metabolic process	None	Extended
MF	GO:0051745	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003885	D-arabinono-1,4-lactone oxidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004177	aminopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004252	serine-type endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004486	methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004488	methylenetetrahydrofolate dehydrogenase (NADP+) activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004556	alpha-amylase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005253	monoatomic anion channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005254	chloride channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005886	plasma membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006099	tricarboxylic acid cycle	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006520	amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006534	cysteine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006553	lysine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006820	monoatomic anion transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006821	chloride transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008236	serine-type peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008238	exopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008837	diaminopimelate epimerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009069	serine family amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009085	lysine biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009092	homoserine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015977	carbon fixation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016831	carboxy-lyase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016854	racemase and epimerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017171	serine hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019346	transsulfuration	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019842	vitamin binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022832	voltage-gated channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022839	monoatomic ion gated channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030170	pyridoxal phosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0036361	racemase activity, acting on amino acids and derivatives	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046451	diaminopimelate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0047429	nucleoside triphosphate diphosphatase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0047661	amino-acid racemase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0050661	NADP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0050667	homocysteine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0070279	vitamin B6 binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003451	LytB/IspH	128	468

External Links

No external refs found!

Mp5g09880.1 (ISPH, CLB6, HDR)

Expression Profile

Co-expression Networks

Functional Annotation