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  5. Mp4g24080.1

Mp4g24080.1 (RRP41)


Aliases : RRP41

Description : component *(RRP41) of exosome EXO9 core complex


Gene families : OG0007886 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp4g24080.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_78


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003951 NAD+ kinase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005488 binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005666 RNA polymerase III complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006739 NADP metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006741 NADP biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0016593 Cdc73/Paf1 complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019362 pyridine nucleotide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031323 regulation of cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0048193 Golgi vesicle transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072524 pyridine-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0106413 RNA dihydrouridine synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR015847 ExoRNase_PH_dom2 151 216
IPR001247 ExoRNase_PH_dom1 18 148
No external refs found!