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Aliases : LARP6c, AtLARP6c
Description : regulatory protein *(LARP6) of mRNA quality control
Gene families : OG0055361 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp4g22960.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_18 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003684 | damaged DNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004334 | fumarylacetoacetase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004425 | indole-3-glycerol-phosphate synthase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004506 | squalene monooxygenase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004797 | thymidine kinase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006259 | DNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006265 | DNA topological change | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006281 | DNA repair | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006974 | DNA damage response | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006996 | organelle organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0007062 | sister chromatid cohesion | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016822 | hydrolase activity, acting on acid carbon-carbon bonds | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016823 | hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0019206 | nucleoside kinase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0030163 | protein catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0031390 | Ctf18 RFC-like complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0033554 | cellular response to stress | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0042393 | histone binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0050789 | regulation of biological process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0050794 | regulation of cellular process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051276 | chromosome organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051716 | cellular response to stimulus | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0065007 | biological regulation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071103 | DNA conformation change | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006630 | La_HTH | 203 | 261 |
| No external refs found! |