Mp4g17130.1

Description : not classified

Gene families : OG0054942 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp4g17130.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_176

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0000166	nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0000469	obsolete cleavage involved in rRNA processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0001510	RNA methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0001522	pseudouridine synthesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003674	molecular_function	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003682	chromatin binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003697	single-stranded DNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003724	RNA helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003725	double-stranded RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004386	helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005253	monoatomic anion channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005254	chloride channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005488	binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006325	chromatin organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006338	chromatin remodeling	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006820	monoatomic anion transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006821	chloride transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007010	cytoskeleton organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007051	spindle organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008168	methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008186	ATP-dependent activity, acting on RNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0008303	caspase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008649	rRNA methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009451	RNA modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016435	rRNA (guanine) methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022832	voltage-gated channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022839	monoatomic ion gated channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030684	preribosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031123	RNA 3'-end processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031124	mRNA 3'-end processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031167	rRNA methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0031491	nucleosome binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0032040	small-subunit processome	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0034457	Mpp10 complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0036265	RNA (guanine-N7)-methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042254	ribosome biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042274	ribosomal small subunit biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044085	cellular component biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0044877	protein-containing complex binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051225	spindle assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070475	rRNA base methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070476	rRNA (guanine-N7)-methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0070652	HAUS complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070925	organelle assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097159	organic cyclic compound binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901363	heterocyclic compound binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1905369	endopeptidase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR012459	Rrp15	140	262

External Links

No external refs found!

Mp4g17130.1

Expression Profile

Co-expression Networks

Functional Annotation