Coexpression cluster: Cluster_176 (Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030684 preribosome 4.65% (2/43) 6.82 0.000133 0.010769
GO:0032040 small-subunit processome 4.65% (2/43) 7.23 7.1e-05 0.011571
GO:0006139 nucleobase-containing compound metabolic process 13.95% (6/43) 2.61 0.000416 0.016843
GO:0006364 rRNA processing 4.65% (2/43) 5.23 0.001281 0.017298
GO:0016072 rRNA metabolic process 4.65% (2/43) 5.23 0.001281 0.017298
GO:1990904 ribonucleoprotein complex 4.65% (2/43) 5.12 0.001505 0.01741
GO:0016070 RNA metabolic process 11.63% (5/43) 3.05 0.000324 0.017472
GO:0001522 pseudouridine synthesis 4.65% (2/43) 5.5 0.000887 0.017963
GO:0090304 nucleic acid metabolic process 11.63% (5/43) 2.57 0.001443 0.017977
GO:0034660 ncRNA metabolic process 6.98% (3/43) 3.86 0.001142 0.0185
GO:0003676 nucleic acid binding 16.28% (7/43) 2.11 0.001036 0.018646
GO:0046483 heterocycle metabolic process 13.95% (6/43) 2.46 0.000713 0.019252
GO:0006725 cellular aromatic compound metabolic process 13.95% (6/43) 2.46 0.000713 0.019252
GO:1901360 organic cyclic compound metabolic process 13.95% (6/43) 2.41 0.000851 0.019688
GO:0019856 pyrimidine nucleobase biosynthetic process 2.33% (1/43) 8.82 0.002214 0.019927
GO:0006206 pyrimidine nucleobase metabolic process 2.33% (1/43) 8.82 0.002214 0.019927
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 2.33% (1/43) 8.82 0.002214 0.019927
GO:0004590 orotidine-5'-phosphate decarboxylase activity 2.33% (1/43) 8.82 0.002214 0.019927
GO:0009451 RNA modification 4.65% (2/43) 4.61 0.003036 0.024592
GO:0034641 cellular nitrogen compound metabolic process 13.95% (6/43) 2.06 0.002916 0.024867
GO:0009112 nucleobase metabolic process 2.33% (1/43) 7.82 0.004423 0.029858
GO:0042803 protein homodimerization activity 2.33% (1/43) 7.82 0.004423 0.029858
GO:0046112 nucleobase biosynthetic process 2.33% (1/43) 7.82 0.004423 0.029858
GO:0000774 adenyl-nucleotide exchange factor activity 2.33% (1/43) 7.82 0.004423 0.029858
GO:0034470 ncRNA processing 4.65% (2/43) 4.01 0.006836 0.038188
GO:0005811 lipid droplet 2.33% (1/43) 7.23 0.006628 0.038347
GO:0042802 identical protein binding 2.33% (1/43) 7.23 0.006628 0.038347
GO:0009678 diphosphate hydrolysis-driven proton transmembrane transporter activity 2.33% (1/43) 7.23 0.006628 0.038347
GO:0012511 monolayer-surrounded lipid storage body 2.33% (1/43) 7.23 0.006628 0.038347
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_79 0.007 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_182 0.006 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Brassica rapa Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm) Cluster_199 0.008 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Marchantia polymorpha Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm) Cluster_130 0.011 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol Compare
Sequences (43) (download table)

InterPro Domains

GO Terms

Family Terms