Mp4g16650.1

Description : component *(NRP-ABCDE10) of RNA polymerase complexes

Gene families : OG0054904 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp4g16650.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_78

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003697	single-stranded DNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003725	double-stranded RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003909	DNA ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003910	DNA ligase (ATP) activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003951	NAD+ kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005048	signal sequence binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006259	DNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006281	DNA repair	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006310	DNA recombination	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006354	DNA-templated transcription elongation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006621	protein retention in ER lumen	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006739	NADP metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006741	NADP biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006974	DNA damage response	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0008023	transcription elongation factor complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016409	palmitoyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016570	histone modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0016593	Cdc73/Paf1 complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016746	acyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016763	pentosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019208	phosphatase regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019211	phosphatase activator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032507	maintenance of protein location in cell	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033554	cellular response to stress	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0035437	maintenance of protein localization in endoplasmic reticulum	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0042277	peptide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043138	3'-5' DNA helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043687	post-translational protein modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0045185	maintenance of protein location	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0046923	ER retention sequence binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051235	maintenance of location	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051651	maintenance of location in cell	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0072595	maintenance of protein localization in organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0101005	deubiquitinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000268	RPABC5/Rpb10	1	59

External Links

No external refs found!

Mp4g16650.1

Expression Profile

Co-expression Networks

Functional Annotation