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  5. Bra012513

Bra012513


Description : EC_4.2 carbon-oxygen lyase. mono-/sesquiterpene-/diterpene synthase


Gene families : OG0027605 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra012513
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_173


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Brassica rapa GO terms from Neighborhoods
CC GO:0009536 plastid IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 14 78
IPR005630 Terpene_synthase_metal-bd 152 417
No external refs found!