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Aliases : SUF4
Description : FLC-binding component *(SUF4) of FRI-C transcription effector complex. C2H2-type transcription factor *(SUF4)
Gene families : OG0008483 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp4g13860.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_52 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0000124 | SAGA complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003682 | chromatin binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003712 | transcription coregulator activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003909 | DNA ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005681 | spliceosomal complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006310 | DNA recombination | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016197 | endosomal transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016482 | cytosolic transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030117 | membrane coat | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030120 | vesicle coat | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030127 | COPII vesicle coat | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030906 | retromer, cargo-selective complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0044877 | protein-containing complex binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0070461 | SAGA-type complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0106413 | RNA dihydrouridine synthase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1902493 | acetyltransferase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1905368 | peptidase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |