Mp4g12170.1

Description : component *(SMG8) of SMG1C protein kinase complex

Gene families : OG0017794 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp4g12170.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_71

Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEA	Interproscan
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006401	RNA catabolic process	None	Extended
BP	GO:0006402	mRNA catabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0000160	phosphorelay signal transduction system	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003674	molecular_function	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004386	helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004673	protein histidine kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005488	binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009308	amine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009314	response to radiation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009416	response to light stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009581	detection of external stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009582	detection of abiotic stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009583	detection of light stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009584	detection of visible light	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009628	response to abiotic stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009690	cytokinin metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0010817	regulation of hormone levels	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0018298	obsolete protein-chromophore linkage	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031011	Ino80 complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0035556	intracellular signal transduction	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042445	hormone metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043085	positive regulation of catalytic activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044093	positive regulation of molecular function	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051606	detection of stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0097346	INO80-type complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0110154	RNA decapping	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0110156	methylguanosine-cap decapping	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140299	small molecule sensor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1904949	ATPase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR019354	SMG8-like	971	1033
IPR019354	SMG8-like	1338	1464
IPR019354	SMG8-like	789	965
IPR019354	SMG8-like	299	404

External Links

No external refs found!

Mp4g12170.1

Expression Profile

Co-expression Networks

Functional Annotation