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  5. Mp4g10900.1

Mp4g10900.1 (LHCB5)


Aliases : LHCB5

Description : component *(LHCb5) of LHC-II complex


Gene families : OG0005300 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp4g10900.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_4_131820.1 LHCB5 component *(LHCb5) of LHC-II complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_69440.1 LHCB5 component *(LHCb5) of LHC-II complex 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004109 coproporphyrinogen oxidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004356 glutamine synthetase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004418 hydroxymethylbilane synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004556 alpha-amylase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006412 translation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006542 glutamine biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009522 photosystem I IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009536 plastid IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009538 photosystem I reaction center IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010109 regulation of photosynthesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0010242 oxygen evolving activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016211 ammonia ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016987 sigma factor activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042548 regulation of photosynthesis, light reaction IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042549 photosystem II stabilization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043226 organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 89 253
No external refs found!