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  5. Mp4g08580.1

Mp4g08580.1 (PUB60, MAC3B)


Aliases : PUB60, MAC3B

Description : E3 ubiquitin protein ligase *(PUB60). component *(MAC3) of MAC spliceosome-associated complex


Gene families : OG0018773 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp4g08580.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_5


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0000347 THO complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0000445 THO complex part of transcription export complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004455 ketol-acid reductoisomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004484 mRNA guanylyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005875 microtubule associated complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006370 7-methylguanosine mRNA capping IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008192 RNA guanylyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009452 7-methylguanosine RNA capping IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019905 syntaxin binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030286 dynein complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0036260 RNA capping IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0070568 guanylyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0090730 Las1 complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1902555 endoribonuclease complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1905348 endonuclease complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_rpt 255 286
IPR013915 Pre-mRNA_splic_Prp19 66 131
No external refs found!