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Aliases : RBCS3B
Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer
Gene families : OG0000324 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000324_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp4g06030.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_15 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004089 | carbonate dehydratase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004315 | 3-oxoacyl-[acyl-carrier-protein] synthase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004356 | glutamine synthetase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005198 | structural molecule activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005261 | monoatomic cation channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005840 | ribosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006096 | glycolytic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006534 | cysteine metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006541 | glutamine metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006826 | iron ion transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0009055 | electron transfer activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009092 | homoserine metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009512 | cytochrome b6f complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009522 | photosystem I | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009538 | photosystem I reaction center | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0015252 | proton channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016211 | ammonia ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016829 | lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016836 | hydro-lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019346 | transsulfuration | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019538 | protein metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019725 | cellular homeostasis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0030145 | manganese ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0033573 | high-affinity iron permease complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034755 | iron ion transmembrane transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042592 | homeostatic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043603 | amide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044281 | small molecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0045454 | cell redox homeostasis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046034 | ATP metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0046914 | transition metal ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0050667 | homocysteine metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0051540 | metal cluster binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0051920 | peroxiredoxin activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0070069 | cytochrome complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0070402 | NADPH binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1905862 | ferroxidase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1990204 | oxidoreductase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000894 | RuBisCO_ssu_dom | 71 | 179 |
| No external refs found! |