Mp3g20650.1 (RH1, ATRH1)

Aliases : RH1, ATRH1

Description : not classified

Gene families : OG0000353 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000353_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp3g20650.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_20

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000350	generation of catalytic spliceosome for second transesterification step	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004527	exonuclease activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004637	phosphoribosylamine-glycine ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006144	purine nucleobase metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006366	transcription by RNA polymerase II	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008408	3'-5' exonuclease activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009112	nucleobase metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009987	cellular process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0010024	phytochromobilin biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016409	palmitoyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0016592	mediator complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022618	protein-RNA complex assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035299	inositol pentakisphosphate 2-kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043248	proteasome assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046112	nucleobase biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0050897	cobalt ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051202	phytochromobilin metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0065003	protein-containing complex assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0070403	NAD+ binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071826	protein-RNA complex organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	329	557
IPR001650	Helicase_C	595	707

External Links

No external refs found!

Mp3g20650.1 (RH1, ATRH1)

Expression Profile

Co-expression Networks

Functional Annotation