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  5. Mp3g20440.1

Mp3g20440.1 (VPS35B, LAZ4)


Aliases : VPS35B, LAZ4

Description : component *(VPS35) of Retromer protein recycling complex


Gene families : OG0053258 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp3g20440.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_5


Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0030906 retromer, cargo-selective complex IEA Interproscan
BP GO:0042147 retrograde transport, endosome to Golgi IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0000124 SAGA complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0000813 ESCRT I complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003747 translation release factor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004560 alpha-L-fucosidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006553 lysine metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009085 lysine biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0015928 fucosidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0031248 protein acetyltransferase complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0036452 ESCRT complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046451 diaminopimelate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0070461 SAGA-type complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071985 multivesicular body sorting pathway IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0106413 RNA dihydrouridine synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1902493 acetyltransferase complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005378 Vps35 17 750
No external refs found!