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  5. Mp3g19750.1

Mp3g19750.1


Description : protein factor *(U5-40kDa/snRNP40) of MAC spliceosome-associated complex


Gene families : OG0053207 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp3g19750.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_171


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004560 alpha-L-fucosidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004827 proline-tRNA ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006433 prolyl-tRNA aminoacylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0015928 fucosidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_rpt 55 90
IPR001680 WD40_rpt 268 309
IPR001680 WD40_rpt 139 176
IPR001680 WD40_rpt 99 133
IPR001680 WD40_rpt 182 217
IPR001680 WD40_rpt 227 259
No external refs found!