Mp3g12050.1 (RABA4D, ATRABA4D)

Aliases : RABA4D, ATRABA4D

Description : A-class RAB GTPase

Gene families : OG0002182 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002182_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp3g12050.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_135

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0000814	ESCRT II complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006468	protein phosphorylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008150	biological_process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008152	metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009987	cellular process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016310	phosphorylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016755	aminoacyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031464	Cul4A-RING E3 ubiquitin ligase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0036211	protein modification process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0036452	ESCRT complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043412	macromolecule modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043687	post-translational protein modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071985	multivesicular body sorting pathway	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	18	178

External Links

No external refs found!

Mp3g12050.1 (RABA4D, ATRABA4D)

Expression Profile

Co-expression Networks

Functional Annotation