Mp3g07170.1

Description : component *(uL29) of large ribosomal-subunit (LSU) proteome

Gene families : OG0052255 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp3g07170.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_62

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0000166	nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004055	argininosuccinate synthase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005525	GTP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005741	mitochondrial outer membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005839	proteasome core complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006405	RNA export from nucleus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006406	mRNA export from nucleus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006487	protein N-linked glycosylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006520	amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006525	arginine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006526	arginine biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006643	membrane lipid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006665	sphingolipid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006672	ceramide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006754	ATP biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006913	nucleocytoplasmic transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0008250	oligosaccharyltransferase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0008541	proteasome regulatory particle, lid subcomplex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030008	TRAPP complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043248	proteasome assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046034	ATP metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0050657	nucleic acid transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0050658	RNA transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051028	mRNA transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051168	nuclear export	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051169	nuclear transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051236	establishment of RNA localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0070003	threonine-type peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0099023	vesicle tethering complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001854	Ribosomal_uL29	8	63

External Links

No external refs found!

Mp3g07170.1

Expression Profile

Co-expression Networks

Functional Annotation