- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : AtTRM5a, TRM5a
Description : tRNA guanine-methyltransferase *(TRM5)
Gene families : OG0051985 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp3g03830.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_60 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004519 | endonuclease activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006520 | amino acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006534 | cysteine metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006535 | cysteine biosynthetic process from serine | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006563 | L-serine metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008168 | methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0009001 | serine O-acetyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009070 | serine family amino acid biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016311 | dephosphorylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016412 | serine O-acyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016413 | O-acetyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016740 | transferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019344 | cysteine biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032259 | methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0098599 | palmitoyl hydrolase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR030382 | MeTrfase_TRM5/TYW2 | 290 | 562 |
| No external refs found! |