Mp3g00710.1 (RAB1C, ATRABD2C, ATRAB1C)

Aliases : RAB1C, ATRABD2C, ATRAB1C

Description : D-class RAB GTPase

Gene families : OG0000902 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000902_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp3g00710.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_170

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005741	mitochondrial outer membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006720	isoprenoid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006721	terpenoid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009250	glucan biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015297	antiporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016114	terpenoid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016491	oxidoreductase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016744	transketolase or transaldolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016759	cellulose synthase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0019867	outer membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0030243	cellulose metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0030244	cellulose biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031968	organelle outer membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044042	glucan metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051273	beta-glucan metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051274	beta-glucan biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0055114	obsolete oxidation-reduction process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0070566	adenylyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	10	170

External Links

No external refs found!

Mp3g00710.1 (RAB1C, ATRABD2C, ATRAB1C)

Expression Profile

Co-expression Networks

Functional Annotation