Mp2g25470.1 (ProRS-Cyt, AtProRS-Cyt)

Aliases : ProRS-Cyt, AtProRS-Cyt

Description : proline-tRNA ligase

Gene families : OG0051589 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp2g25470.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_144

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0004827	proline-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006433	prolyl-tRNA aminoacylation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004129	cytochrome-c oxidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004559	alpha-mannosidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005743	mitochondrial inner membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005839	proteasome core complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009892	negative regulation of metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009894	regulation of catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0010629	negative regulation of gene expression	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015923	mannosidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0019866	organelle inner membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031047	regulatory ncRNA-mediated gene silencing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042176	regulation of protein catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043248	proteasome assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0045277	respiratory chain complex IV	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0048038	quinone binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0048519	negative regulation of biological process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0048523	negative regulation of cellular process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0050661	NADP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0070003	threonine-type peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0070069	cytochrome complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0070402	NADPH binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098803	respiratory chain complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1905369	endopeptidase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004154	Anticodon-bd	343	439
IPR002314	aa-tRNA-synt_IIb	154	324
IPR016061	Pro-tRNA_ligase_II_C	466	540

External Links

No external refs found!

Mp2g25470.1 (ProRS-Cyt, AtProRS-Cyt)

Expression Profile

Co-expression Networks

Functional Annotation