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  5. Mp2g23730.1

Mp2g23730.1


Description : scaffold nucleoporin of nuclear pore complex *(NUP93)


Gene families : OG0051449 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp2g23730.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_20


Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
MF GO:0017056 structural constituent of nuclear pore IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000902 cell morphogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005488 binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009653 anatomical structure morphogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0034457 Mpp10 complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043226 organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007231 Nucleoporin_int_Nup93/Nic96 245 822
No external refs found!