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  5. Bra001202

Bra001202 (AtMYB108, BOS1, MYB108)


Aliases : AtMYB108, BOS1, MYB108

Description : MYB class-R2R3 subgroup-19/20 transcription factor


Gene families : OG0006145 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra001202
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Bra040274 AtMYB108, BOS1, MYB108 MYB class-R2R3 subgroup-19/20 transcription factor 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006308 DNA catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009793 embryo development ending in seed dormancy IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015399 primary active transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019439 aromatic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034655 nucleobase-containing compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044270 cellular nitrogen compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046700 heterocycle catabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901361 organic cyclic compound catabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001005 SANT/Myb 21 68
IPR001005 SANT/Myb 74 117
No external refs found!