- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LTPG12
Description : arabinogalactan protein *(Xylogen)
Gene families : OG0025495 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra012033 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_175 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004743 | pyruvate kinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006096 | glycolytic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007021 | tubulin complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007023 | post-chaperonin tubulin folding pathway | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030955 | potassium ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031047 | regulatory ncRNA-mediated gene silencing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0031420 | alkali metal ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0048487 | beta-tubulin binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0070403 | NAD+ binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016140 | Bifunc_inhib/LTP/seed_store | 29 | 119 |
| No external refs found! |