Mp2g10240.1 (TDP1)

Aliases : TDP1

Description : tyrosyl-DNA phosphodiesterase *(TDP1)

Gene families : OG0050379 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp2g10240.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_78

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	DNA damage response	None	Extended
MF	GO:0008081	phosphoric diester hydrolase activity	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000009	alpha-1,6-mannosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0000030	mannosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003697	single-stranded DNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003725	double-stranded RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003909	DNA ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003911	DNA ligase (NAD+) activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004000	adenosine deaminase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004376	glycolipid mannosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004518	nuclease activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005216	monoatomic ion channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005261	monoatomic cation channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005262	calcium channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005666	RNA polymerase III complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005759	mitochondrial matrix	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005856	cytoskeleton	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006284	base-excision repair	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006351	DNA-templated transcription	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006383	transcription by RNA polymerase III	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006479	protein methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006497	protein lipidation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006505	GPI anchor metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006816	calcium ion transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008168	methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008213	protein alkylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0009975	cyclase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0009976	tocopherol cyclase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016073	snRNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016180	snRNA processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016571	histone methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0018022	peptidyl-lysine methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0018205	peptidyl-lysine modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019239	deaminase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030515	snoRNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030880	RNA polymerase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031123	RNA 3'-end processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031974	membrane-enclosed lumen	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0032039	integrator complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034470	ncRNA processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034472	snRNA 3'-end processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034477	U6 snRNA 3'-end processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034968	histone lysine methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043233	organelle lumen	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0055029	nuclear DNA-directed RNA polymerase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0070013	intracellular organelle lumen	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070588	calcium ion transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097159	organic cyclic compound binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0097553	calcium ion transmembrane import into cytosol	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0098657	import into cell	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0098659	inorganic cation import across plasma membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0098703	calcium ion import across plasma membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0098739	import across plasma membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0099587	inorganic ion import across plasma membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901363	heterocyclic compound binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901702	salt transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR010347	Tdp1	220	662

External Links

No external refs found!

Mp2g10240.1 (TDP1)

Expression Profile

Co-expression Networks

Functional Annotation