Mp1g26290.1 (RAD23D)

Aliases : RAD23D

Description : ubiquitin-proteasome shuttle factor *(RAD23)

Gene families : OG0049301 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp1g26290.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_80

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003684	damaged DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006289	nucleotide-excision repair	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	DNA damage response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003824	catalytic activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004017	adenylate kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004252	serine-type endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005839	proteasome core complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006629	lipid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006631	fatty acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006633	fatty acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006644	phospholipid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009719	response to endogenous stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009725	response to hormone	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0010033	response to organic substance	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016307	obsolete phosphatidylinositol phosphate kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016790	thiolester hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016887	ATP hydrolysis activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022804	active transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042221	response to chemical	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044255	cellular lipid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046486	glycerolipid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0050145	nucleoside monophosphate kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0070003	threonine-type peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR015940	UBA	358	393
IPR015940	UBA	166	204
IPR000626	Ubiquitin-like_dom	3	76
IPR015360	XPC-bd	276	332

External Links

No external refs found!

Mp1g26290.1 (RAD23D)

Expression Profile

Co-expression Networks

Functional Annotation