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  5. Mp1g25630.1

Mp1g25630.1 (ATCDC48, CDC48,...)


Aliases : ATCDC48, CDC48, AtCDC48A, CDC48A

Description : platform ATPase CDC48


Gene families : OG0000642 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp1g25630.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_144


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004176 ATP-dependent peptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005783 endoplasmic reticulum IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005787 signal peptidase complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005885 Arp2/3 protein complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006465 signal peptide processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006621 protein retention in ER lumen IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0007015 actin filament organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0015629 actin cytoskeleton IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0017003 protein-heme linkage IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0017006 protein-tetrapyrrole linkage IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030832 regulation of actin filament length IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030833 regulation of actin filament polymerization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032012 regulation of ARF protein signal transduction IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032271 regulation of protein polymerization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032507 maintenance of protein location in cell IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032535 regulation of cellular component size IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032956 regulation of actin cytoskeleton organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032970 regulation of actin filament-based process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033043 regulation of organelle organization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043254 regulation of protein-containing complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044087 regulation of cellular component biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0045010 actin nucleation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0045185 maintenance of protein location IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0046923 ER retention sequence binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051493 regulation of cytoskeleton organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072595 maintenance of protein localization in organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090066 regulation of anatomical structure size IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0110053 regulation of actin filament organization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1902903 regulation of supramolecular fiber organization IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 526 659
IPR003959 ATPase_AAA_core 253 382
IPR041569 AAA_lid_3 405 446
IPR041569 AAA_lid_3 682 723
IPR003338 CDC4_N-term_subdom 38 119
IPR004201 Cdc48_dom2 139 202
No external refs found!