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  5. Mp1g25160.1

Mp1g25160.1 (PPR4)


Aliases : PPR4

Description : trans-splicing factor *(PPR4)


Gene families : OG0049202 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp1g25160.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_34


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004655 porphobilinogen synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004832 valine-tRNA ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006438 valyl-tRNA aminoacylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008658 penicillin binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016843 amine-lyase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016844 strictosidine synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0031406 carboxylic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0033293 monocarboxylic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043177 organic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR033443 PPR_long 623 765
IPR002885 Pentatricopeptide_rpt 375 402
IPR002885 Pentatricopeptide_rpt 236 261
IPR000504 RRM_dom 91 164
IPR002885 Pentatricopeptide_rpt 266 315
IPR002885 Pentatricopeptide_rpt 546 595
IPR002885 Pentatricopeptide_rpt 337 369
IPR002885 Pentatricopeptide_rpt 406 454
IPR002885 Pentatricopeptide_rpt 476 525
No external refs found!