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  5. Mp1g21630.1

Mp1g21630.1


Description : substrate adaptor of CUL4-based E3 ubiquitin ligase complex


Gene families : OG0048898 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp1g21630.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_20


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004526 ribonuclease P activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004549 tRNA-specific ribonuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006144 purine nucleobase metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009112 nucleobase metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009113 purine nucleobase biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017056 structural constituent of nuclear pore IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030488 tRNA methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0034457 Mpp10 complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0034708 methyltransferase complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043527 tRNA methyltransferase complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046112 nucleobase biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_rpt 28 60
IPR001680 WD40_rpt 242 285
IPR001680 WD40_rpt 67 109
IPR001680 WD40_rpt 115 151
No external refs found!