Bra011645 (ATRABB1B, ATGB2, ATRAB2C, GB2)

Aliases : ATRABB1B, ATGB2, ATRAB2C, GB2

Description : B-class RAB GTPase

Gene families : OG0014160 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra011645
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_154

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003872	6-phosphofructokinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004096	catalase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004519	endonuclease activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004521	RNA endonuclease activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004540	RNA nuclease activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004806	triglyceride lipase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005216	monoatomic ion channel activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005253	monoatomic anion channel activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005254	chloride channel activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005778	peroxisomal membrane	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006090	pyruvate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006096	glycolytic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006820	monoatomic anion transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006821	chloride transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006996	organelle organization	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008443	phosphofructokinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015698	inorganic anion transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016298	lipase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016559	peroxisome fission	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019200	carbohydrate kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0022832	voltage-gated channel activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0022839	monoatomic ion gated channel activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031903	microbody membrane	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0042579	microbody	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0048285	organelle fission	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1901702	salt transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	8	168

External Links

No external refs found!

Bra011645 (ATRABB1B, ATGB2, ATRAB2C, GB2)

Expression Profile

Co-expression Networks

Functional Annotation