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  5. Spov3_chr6.02940

Spov3_chr6.02940 (AtNPC1 - 1)


Aliases : AtNPC1 - 1

Description : not classified


Gene families : OG0001838 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001838_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.02940
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_44


Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005488 binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006298 mismatch repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030983 mismatched DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032200 telomere organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032190 NPC1_N 50 280
IPR003392 Ptc/Disp 1080 1295
IPR000731 SSD 675 825
No external refs found!