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  5. Spov3_chr6.02359

Spov3_chr6.02359 (GLR3.6, ATGLR3.6)


Aliases : GLR3.6, ATGLR3.6

Description : not classified


Gene families : OG0000080 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.02359
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0001.00160 AATP1, ASD not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0001.00161 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0012.00082 iqd33 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S08.00041 GLR3.6, ATGLR3.6 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01593 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01642 GLR3.6, ATGLR3.6 not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01752 TRM2b not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01991 GLR3.6, ATGLR3.6 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.03646 CYP71B16 not classified 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.03944 ATEXO70A1, EXO70A1 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.04329 ATSOFL1, SOFL1 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.05115 TBL6 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01644 TBL39 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.03606 GLR3.6, ATGLR3.6 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.03879 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02678 No alias not classified 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 186 283
IPR004332 Transposase_MuDR 4 46
IPR007527 Znf_SWIM 438 465
No external refs found!