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  5. Spov3_chr6.02202

Spov3_chr6.02202


Description : not classified


Gene families : OG0000013 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000013_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.02202
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_171

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0038.00022 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048364 root development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048731 system development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046848 E_motif 624 686
IPR002885 Pentatricopeptide_rpt 275 303
IPR002885 Pentatricopeptide_rpt 204 233
IPR002885 Pentatricopeptide_rpt 305 335
IPR002885 Pentatricopeptide_rpt 481 500
IPR002885 Pentatricopeptide_rpt 103 131
IPR002885 Pentatricopeptide_rpt 581 605
IPR002885 Pentatricopeptide_rpt 507 554
IPR002885 Pentatricopeptide_rpt 405 451
No external refs found!