Spov3_chr6.01946 (PERK4, AtPERK4)


Aliases : PERK4, AtPERK4

Description : not classified


Gene families : OG0000098 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000098_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.01946
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_648

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0002.00196 ATMLO12, MLO12 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.01270 ATVIP2, VIP2, VIH1 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04189 F8H not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02779 SVR9, AtIF3-2, AtINFC-2 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02947 CSLD2, ATCSLD2 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016020 membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 263 357
IPR000477 RT_dom 796 933
No external refs found!