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  5. Spov3_chr6.01412

Spov3_chr6.01412


Description : plastidial RNA splicing factor *(cPTH))


Gene families : OG0019616 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.01412
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_616


Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006553 lysine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008837 diaminopimelate epimerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008883 glutamyl-tRNA reductase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009085 lysine biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016854 racemase and epimerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035596 methylthiotransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046451 diaminopimelate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0047661 amino-acid racemase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0050497 alkylthioltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001328 Pept_tRNA_hydro 91 269
No external refs found!