- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : KIX8
Description : FRS/FRF-type transcription factor
Gene families : OG0000055 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000055_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr6.01243 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_14 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_chr3.00749 | FAR1 | FRS/FRF-type transcription factor | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00750 | No alias | FRS/FRF-type transcription factor | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01740 | ABO8 | FRS/FRF-type transcription factor | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02786 | No alias | FRS/FRF-type transcription factor | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.04075 | T5L1, ABS5 | FRS/FRF-type transcription factor | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01064 | No alias | FRS/FRF-type transcription factor | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.01901 | No alias | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02484 | FAR1 | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02485 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.02873 | No alias | FRS/FRF-type transcription factor | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.03383 | No alias | FRS/FRF-type transcription factor | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04179 | ABO8 | FRS/FRF-type transcription factor | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04566 | No alias | FRS/FRF-type transcription factor | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02079 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006259 | DNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015074 | DNA integration | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0015297 | antiporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030246 | carbohydrate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030247 | polysaccharide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0055085 | transmembrane transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004330 | FAR1_DNA_bnd_dom | 207 | 310 |
| No external refs found! |