Spov3_chr6.01159 (NLE, AtNLE)


Aliases : NLE, AtNLE

Description : LSU processome assembly factor *(NLE)


Gene families : OG0019636 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.01159
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_1


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005525 GTP binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0017003 protein-heme linkage IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0017006 protein-tetrapyrrole linkage IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019001 guanyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032561 guanyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012972 NLE 17 77
IPR001680 WD40_rpt 362 394
IPR001680 WD40_rpt 148 184
IPR001680 WD40_rpt 237 272
IPR001680 WD40_rpt 444 477
IPR001680 WD40_rpt 277 350
IPR001680 WD40_rpt 194 232
IPR001680 WD40_rpt 105 142
IPR001680 WD40_rpt 399 436
No external refs found!