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Aliases : ATHDA5, HDA05, HDA5
Description : class-II histone deacetylase
Gene families : OG0065218 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr6.01080 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_54 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint signaling | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0000166 | nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004525 | ribonuclease III activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004652 | obsolete polynucleotide adenylyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004672 | protein kinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006468 | protein phosphorylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006813 | potassium ion transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0007088 | regulation of mitotic nuclear division | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0007093 | mitotic cell cycle checkpoint signaling | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0007094 | mitotic spindle assembly checkpoint signaling | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0007165 | signal transduction | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010639 | negative regulation of organelle organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010965 | regulation of mitotic sister chromatid separation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016301 | kinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016310 | phosphorylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016740 | transferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016787 | hydrolase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0022402 | cell cycle process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030246 | carbohydrate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0031577 | spindle checkpoint signaling | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0033043 | regulation of organelle organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0033045 | regulation of sister chromatid segregation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0033046 | negative regulation of sister chromatid segregation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0033047 | regulation of mitotic sister chromatid segregation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0033048 | negative regulation of mitotic sister chromatid segregation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0036211 | protein modification process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043412 | macromolecule modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043631 | obsolete RNA polyadenylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044030 | regulation of DNA methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0045839 | negative regulation of mitotic nuclear division | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0045841 | negative regulation of mitotic metaphase/anaphase transition | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0045930 | negative regulation of mitotic cell cycle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051129 | negative regulation of cellular component organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051726 | regulation of cell cycle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051783 | regulation of nuclear division | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051784 | negative regulation of nuclear division | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051983 | regulation of chromosome segregation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051985 | negative regulation of chromosome segregation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071173 | spindle assembly checkpoint signaling | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071174 | mitotic spindle checkpoint signaling | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901991 | negative regulation of mitotic cell cycle phase transition | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1902100 | negative regulation of metaphase/anaphase transition of cell cycle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1905818 | regulation of chromosome separation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1905819 | negative regulation of chromosome separation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:2000816 | negative regulation of mitotic sister chromatid separation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:2001070 | starch binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:2001251 | negative regulation of chromosome organization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 36 | 336 |
| No external refs found! |