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  5. Spov3_chr6.01075

Spov3_chr6.01075 (KINbeta1, AKINBETA1)


Aliases : KINbeta1, AKINBETA1

Description : not classified


Gene families : OG0003791 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003791_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.01075
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr6.01076 KINbeta1, AKINBETA1 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004602 glutathione peroxidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004332 Transposase_MuDR 144 205
IPR018289 MULE_transposase_dom 345 439
IPR007527 Znf_SWIM 584 619
No external refs found!