Heatmap: Cluster_85 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
- - - - - -2.68 -2.65 - -1.46 - - - - - - - -1.44 4.82 - - - -2.71 - - -0.86 - - - - -
-1.2 -0.59 - -0.7 0.21 -0.11 -0.83 - -1.22 -2.04 -1.06 0.01 -0.62 -0.3 - 0.11 -2.15 3.4 -0.18 - 0.58 -1.4 0.64 -2.43 0.96 -0.45 -0.43 -0.1 -0.77 -0.45
- - - - 1.58 -0.86 - - - - - - 2.01 - - - - 4.21 - - - - 1.97 - - - - - - -
- - -0.04 - 1.01 - -0.96 - - - - - - - - - - 4.57 - - - - - - -0.74 - -1.03 0.79 - -
- - - -1.09 - - - - - -0.02 0.71 -1.19 0.67 -0.19 -1.21 1.95 -1.16 3.61 -0.09 - -0.13 -1.34 - 0.54 - -1.21 - 0.58 0.01 -1.22
-1.07 -1.27 -0.26 -1.39 -1.43 0.38 -0.75 -1.18 -1.1 -0.77 -0.39 -1.47 0.56 1.73 0.58 -0.2 -1.14 2.97 -1.3 -1.19 -1.13 -0.5 1.05 -0.31 -1.83 -1.1 -0.81 -1.51 -3.19 -0.15
-0.21 - -0.59 - - - - - -0.8 - -0.93 -2.17 0.41 1.46 -2.2 - - 3.93 - -1.2 -2.07 - 2.31 -0.51 -2.24 -2.16 -1.4 -1.96 - -2.09
- - -3.03 -2.05 - -3.41 -2.38 -3.08 - -3.23 - -2.3 -2.19 0.15 -0.72 - - 4.36 -2.24 -3.33 - - 2.52 - - -2.45 - -2.09 - -
Spov3_chr1.01264 (ENGase85A)
- - - - - - - - - - - - -0.64 - - - - 4.81 - - - - 0.4 - - - - - - -
-1.29 -2.4 -0.83 0.38 -1.57 -5.08 -1.84 -0.84 -1.43 -1.05 -1.21 -2.06 0.53 -3.99 -1.75 -2.0 -1.37 3.69 -1.61 -1.61 -1.85 -0.98 2.21 -1.97 -1.6 -1.31 -0.84 -0.15 -0.44 -2.18
-2.85 -2.74 -3.62 -5.37 -5.77 -7.0 - -6.4 -5.22 -2.59 -4.18 -6.11 0.5 -4.4 -3.3 -5.37 -6.16 4.33 -3.92 -6.37 -2.7 -3.16 2.73 -4.63 -3.62 -4.11 -3.66 -2.1 -3.82 -6.82
Spov3_chr1.01538 (ATECP31)
- - - - - -0.24 - - - - - - - - - - - 4.47 - - - - 2.79 - - - - - - -
- - - - - - 1.64 - - - - - - - - 2.75 - 3.83 1.64 1.5 - - - - - - - - - -
- - - - - - - -1.18 -0.83 - - - - -1.08 -0.2 0.68 - 4.68 - - - - - - - - -1.24 - - -
- - - - 1.28 - - - - - - - 1.34 - - - - 4.32 - - 1.51 - - 0.18 0.16 - - - - -
-2.25 - - - - - - - - - - - -1.47 - - - - 4.79 - - -2.6 - -0.5 -2.74 - - - - -1.43 -1.11
-0.85 -0.22 -0.87 -0.72 -0.47 -0.84 - -0.81 0.07 -1.03 -0.59 -0.73 0.13 -1.74 -2.77 -0.18 -3.62 3.36 -0.39 -1.9 -2.89 -0.76 2.24 -1.0 -2.88 -1.39 -0.48 -1.25 0.25 -2.83
- -2.4 -1.62 - -0.84 -1.58 -1.49 -0.5 -2.46 -1.2 - -2.41 1.82 -0.3 0.48 - -1.28 3.64 - -0.93 -2.75 -1.46 2.12 0.77 - - -0.58 - -2.39 -2.53
- - - - - - - - - - - - 1.59 - - - - 4.75 - - - - - - - - - - - -
-4.24 -4.23 -5.43 -3.84 -4.04 - -4.92 -4.06 -3.69 -5.36 -5.32 -5.34 -0.79 -5.53 -2.44 - -5.36 4.67 -4.28 -4.32 -6.54 -5.37 1.35 -3.1 -3.72 -3.79 -2.69 -4.64 -4.69 -4.91
- - - - - - - - 0.41 - - - 0.59 - - - - 3.83 - 0.32 - - 2.16 - - - - 2.2 0.45 0.32
2.05 0.95 -0.04 - 1.49 -0.89 - - - - - - -1.58 - -1.86 - - 4.07 - - - - -0.91 0.09 - - - - -0.77 -
- - - - - - - - - - - - - - - - - 4.91 - - - - - - - - - - - -
-3.7 - - - -3.58 - - -2.48 - - - - 1.15 -1.79 - - - 4.41 -2.46 - -2.48 - 2.43 -3.34 - - - - - -3.63
0.57 -1.05 0.32 - -0.51 0.43 - -0.34 0.19 -2.27 -0.51 -2.24 -0.1 -2.22 - 0.6 - 3.9 -2.09 - -1.62 - 0.24 -1.32 - -0.75 - -1.97 -1.07 -0.71
- - - - - - - - - - - - - - - - - 4.91 - - - - - - - - - - - -
- - - - 2.12 - - - - - - - 1.65 - - - - 4.08 - - - - 2.12 - - - - - - 0.31
-0.09 0.1 -0.34 -0.37 0.04 -0.07 -0.31 0.01 -0.23 -0.2 -0.52 -0.5 -0.34 0.35 0.03 0.01 -0.06 2.02 -0.24 -0.38 -0.09 -0.14 -0.13 -0.0 -0.22 -0.24 -0.44 -0.29 -0.01 -0.38
- - - - - - - - - -0.33 - - - - - - - 4.85 - - - - - - - - - -1.36 - -
- - - - 1.9 - - - - - - - - - - - - 4.6 - - - - 1.04 - - - - - - -
- -2.05 - - - - -2.34 - - -2.04 - - 0.23 - - - - 4.52 - - - - 2.36 - - - - - - -
-0.76 -1.21 -1.93 -1.45 -1.58 -0.25 -1.11 -1.28 -2.32 -0.7 -1.88 -1.16 1.32 0.26 -0.96 -0.69 -0.16 3.43 -2.33 -1.76 0.16 -1.48 1.44 -0.93 -1.43 -0.58 -1.39 -0.88 -0.79 -0.93
2.03 - - - - - 1.97 - - - - - - - - - - 4.23 - - - - 1.68 - - - - - - -
0.88 0.44 -0.63 -0.7 0.92 -1.04 -0.88 - - - - - -0.72 - - - - 3.99 - - - - 1.42 - - 0.05 - - -0.57 0.83
- - - - 2.2 - - - - - - - - - - - - 4.67 - - - - - - - - - - - -
0.36 0.55 0.06 -0.13 -0.24 -1.7 -0.64 -0.84 -0.03 -0.15 0.27 -0.51 0.1 -0.19 -0.7 -0.41 -1.0 2.15 -0.54 -0.93 0.04 0.01 1.12 -0.43 -0.22 -0.24 -0.3 0.25 -1.26 -0.76
0.31 - -0.22 -1.66 -0.25 -0.93 -1.8 - -1.91 -0.68 -1.8 -0.89 -0.73 -0.73 - - - 4.32 - - -0.2 - -0.96 - -0.78 -1.76 -0.37 - - -
- - - - - - - - - - - - 1.64 - - - - 4.75 - - - - - - - - - - - -
- - - - -0.52 - - - - - -2.11 - - - - - - 4.85 - - - - -2.27 - - - - - - -
-0.65 -1.76 0.39 0.25 0.98 -0.35 0.37 -1.65 - 0.72 - -0.86 -1.71 -0.62 -1.82 -1.46 -0.07 3.17 - -1.9 - -0.81 1.94 -0.61 - -0.88 - -1.76 0.24 0.16
0.51 0.46 0.05 -0.33 0.23 -0.35 -0.67 -0.1 -0.31 -0.06 -0.41 -0.26 -0.41 -0.05 -1.11 -0.81 -0.63 1.94 -0.85 -0.27 -0.5 -0.32 0.77 -0.38 -0.21 -0.69 -0.37 0.32 0.41 0.1
- - - - - - - - - - - - - - - 2.92 - 4.49 - - - - - - - - - - - -
0.21 -0.44 -2.48 -1.93 -0.76 -3.45 -4.04 -3.17 -4.61 -3.25 -4.43 -3.47 -0.06 -0.93 -1.33 -2.8 -3.13 4.25 -3.19 -2.26 -2.48 -4.0 2.0 -1.94 -4.36 -2.12 -4.04 -4.31 -2.71 -6.17
0.49 -0.03 -1.58 -0.69 0.11 -2.85 -3.73 -2.25 -3.77 -3.15 -3.27 -2.47 0.41 0.69 -0.07 -1.64 -1.45 3.79 -2.25 -1.48 -1.95 -2.73 2.01 -1.58 -3.13 -1.48 -2.61 -3.83 -2.41 -5.53
1.67 - - 0.64 - - 0.71 - - - - - - 0.53 - - 0.44 3.79 - 0.4 0.51 - - 1.57 0.35 - - - - -
-0.51 0.13 -1.07 -1.42 -0.19 -0.2 -0.81 -0.82 -1.49 -0.46 -1.29 -0.29 -0.55 -0.74 -1.11 -0.78 -1.65 3.26 -1.09 -1.15 -0.85 -1.14 1.54 0.44 -0.64 -0.68 -0.97 -0.18 -1.03 -0.81
-0.41 -0.03 -0.47 -0.65 -1.46 -0.58 -1.87 -1.49 -1.37 -0.53 -1.02 -0.76 -0.08 0.67 -0.48 -0.71 -1.3 3.23 -1.09 -1.1 -1.04 -1.35 0.83 -0.85 -1.01 -0.47 -0.33 -1.21 -0.68 1.14
0.56 -0.16 -1.82 -2.06 0.71 -2.83 -2.18 -1.31 -2.19 -1.84 -3.8 -4.0 -1.73 0.84 -1.69 -3.29 -3.62 4.11 -4.96 -3.17 -4.65 -3.87 1.32 -3.42 -3.87 -4.26 -3.76 -2.76 -0.1 -4.31
- - - - - - - - - - - 1.74 - - - - - 4.74 - - - - - - - - - - - -
0.69 0.15 -0.96 -0.49 1.15 -1.87 -1.63 -2.62 -0.93 -1.75 -1.05 -1.5 -0.74 0.68 -0.89 -2.2 -1.59 3.63 -1.94 -1.6 -2.2 -2.36 0.95 -3.42 -1.59 -1.83 -1.72 -1.48 0.01 -1.36
-0.33 -1.22 -2.47 -0.86 -1.49 - -3.06 -1.67 -2.99 -2.17 -3.93 -2.64 0.69 -1.03 -3.22 -1.35 - 4.26 -2.19 -1.77 -3.16 -0.71 0.06 -0.38 -4.17 -4.39 -0.83 -1.16 -0.64 -3.2
0.22 -1.68 -1.95 - -1.92 -2.99 - - -0.8 0.48 - -2.98 0.06 - -1.94 0.03 -2.96 3.38 -1.4 - 1.29 -0.78 2.41 -0.63 0.03 -0.04 -1.2 -0.31 -1.75 -
-1.48 -0.36 -1.15 0.75 -2.85 -1.85 -2.87 -2.68 -3.43 -1.35 -1.7 -1.81 0.46 0.56 -0.63 - - 3.53 -1.91 -1.29 -0.39 -0.92 1.77 -0.09 -0.02 -3.65 -0.49 -0.1 -0.95 -1.67
-4.07 -5.09 -5.73 -6.67 -4.34 -6.36 -8.85 -6.94 -7.34 -6.28 -7.2 -8.41 -1.64 -4.53 -4.14 -5.55 -5.7 4.54 -6.37 -7.69 -6.18 -6.82 2.56 -6.28 -7.04 -6.26 -6.74 -7.26 -5.73 -8.05
-1.24 0.7 -1.52 -0.07 -0.85 -0.77 -0.11 -3.24 -1.88 -0.34 0.19 -1.2 -0.27 -0.21 - -1.35 -1.1 3.65 -0.79 -3.42 0.42 -1.8 1.49 - -1.28 -2.32 -3.48 -1.28 -3.12 -1.16
Spov3_chr5.00679 (CYP78A8)
-3.42 -2.84 -3.19 -0.97 -2.76 -0.15 -0.75 -1.55 -1.48 -3.69 -2.33 -1.87 0.14 -4.1 -2.83 -2.42 -2.2 4.3 -3.52 -0.7 -2.74 -2.77 1.37 -2.1 -3.64 -2.87 -3.38 -2.11 -3.51 -1.37
0.56 0.4 0.13 -0.56 0.07 -0.85 -0.89 -0.25 -0.35 -0.51 -0.27 -0.61 -1.47 0.5 -0.53 -0.58 -0.34 2.37 -0.74 -0.88 -0.64 -0.72 1.31 -0.45 -0.84 -0.53 -0.23 0.04 -0.09 -0.52
-1.87 -1.91 -2.23 -2.25 -1.71 - -4.43 -3.62 -2.43 -2.01 -3.54 -4.73 0.33 - -4.74 -2.19 -3.72 4.19 -1.49 -4.77 -1.05 -1.83 2.08 -0.84 -1.7 -2.15 -0.95 -0.48 -1.21 -3.09
0.19 -0.02 -0.42 -0.39 0.24 -0.34 -0.94 -0.76 -0.35 -0.51 -0.25 -0.55 0.18 1.11 -0.12 0.07 -0.23 1.82 -0.11 -0.7 -0.3 -0.13 0.41 -0.15 -0.42 0.02 -0.4 0.15 -0.37 -0.47
- - - - - - - - - - - - - - - - - 4.74 - - - - 1.71 - - - - - - -
- - - - - -2.09 - -1.8 - -2.02 - - 1.11 - - - -2.07 4.39 - - - - 1.64 0.21 - - -2.14 - -0.84 -0.32
-2.02 -1.51 -2.93 -3.91 -1.56 -1.84 -3.94 -4.49 -1.15 -0.71 -3.87 -1.36 2.1 -0.87 -2.24 -2.01 -1.89 3.96 -1.4 -1.47 -1.6 -1.7 1.49 -2.37 -2.37 -1.64 -1.12 -2.82 -1.84 -3.0
-0.72 -0.18 -2.02 -0.42 - -2.02 -2.1 - - -1.8 - - -1.85 0.09 - - 0.19 4.17 -0.61 - -2.32 -1.99 1.45 - -2.09 -0.54 - -0.64 - -0.32
- - - - - - - - - - - - - - - - - 4.59 - - - - 2.55 - - - - - - -
0.79 0.68 -1.0 -0.92 0.56 -2.37 -3.25 -2.52 -4.01 -3.39 -3.6 -2.98 -0.51 0.35 -0.36 -1.78 -1.82 3.76 -1.65 -1.64 -1.49 -1.97 1.87 -1.28 -3.05 -1.52 -2.17 -2.77 -1.98 -4.6
-3.78 -4.22 -3.87 -4.0 -4.41 -6.11 -6.46 -5.04 -5.05 -3.76 -5.04 -5.95 -1.08 -3.69 -5.06 -6.02 -6.82 4.55 -5.31 -6.06 -4.52 -4.73 2.35 -5.65 -4.99 -5.31 -4.44 -4.15 -4.92 -7.89
0.68 0.37 -0.43 -1.28 -0.75 -1.86 -2.74 -1.75 -2.48 -1.75 -4.05 -4.06 -1.2 1.08 -1.48 -2.65 -3.75 3.86 -2.59 -2.33 -2.11 -3.02 2.31 -3.54 -4.86 -3.53 -3.73 -2.66 -1.82 -6.83
- - - - - - - - - - - - 1.41 - - - - 4.36 - - - - 2.64 - - - - - - -0.88
-2.32 -1.8 -3.85 -1.84 -0.62 -0.82 -0.24 -0.5 -2.06 -0.37 -0.84 -0.21 -0.95 -0.65 -1.77 -3.97 -1.29 4.15 - -1.93 -2.99 -0.95 -0.58 -1.62 -0.04 -0.95 -1.26 -2.15 -2.18 -3.99
- - - - - - - - - - - - 1.73 - - - - 4.01 - - - - 3.0 - 0.52 -0.99 - - -0.68 -
1.74 - -0.39 - 0.4 - - - 0.94 -1.82 - - - - - - - 4.17 - - - - - - - - - -1.47 -14.21 2.01
2.14 - -0.22 - -0.32 - - - - -3.95 - - - - - - - 4.26 - - - - - - - - - -1.42 -14.69 2.13
-0.06 -0.14 -0.09 -0.27 -0.31 -0.3 -0.2 -0.18 -0.07 -0.19 -0.08 -0.08 0.19 -0.06 -0.16 -0.04 -0.07 1.62 -0.13 -0.19 -0.08 -0.19 0.52 -0.38 -0.12 -0.08 0.02 -0.1 -0.35 -0.25
2.71 - - - - - - - - - - - - - - - - 4.13 - - - - - 2.58 - - - - - -
- - - - 1.2 - - -0.54 - 1.7 - - 0.44 -0.72 -0.76 -0.54 - 4.0 - - - - 2.18 - - - - - - -
Spov3_chr6.01075 (KINbeta1)
- - - - 3.45 - - - - - - - - - - - - 4.26 - - - - - - - - - - - -
- - - - - - - - -0.77 - - - 1.67 0.57 - - 0.05 4.22 - - - -1.09 2.2 - - - - - - -
-1.69 -2.09 -1.01 -0.98 -0.09 -1.73 -2.25 -0.76 -0.67 -3.06 -1.88 -3.13 1.53 0.08 0.63 -1.88 -2.1 3.34 -0.09 0.32 -1.7 -3.22 1.66 0.23 -0.0 -3.0 -0.62 -2.04 -2.19 -
- - - - - - - - - - - - - - - - - 4.52 - - - - 0.74 1.81 - - - - - 0.89
Spov3_S04.00037 (CASPL1B2)
- - 0.79 - - - - - - - - - 0.84 - - - - 4.55 - - - - - - - - 1.62 - - -
- - - - 1.64 - - - - - - - 1.74 1.72 - - - 3.84 - - - - - 1.55 - 1.61 - - - -
- - - - - - - - - - - - -3.14 - -3.29 - - 4.49 -2.01 - -0.92 - 2.52 - - -3.25 -2.4 - -2.08 -2.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.