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Aliases : RSM2, RL1, ATRL1
Description : not classified
Gene families : OG0065190 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr6.01025 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_162 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0000166 | nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003682 | chromatin binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003712 | transcription coregulator activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003743 | translation initiation factor activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004175 | endopeptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005516 | calmodulin binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005643 | nuclear pore | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006405 | RNA export from nucleus | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006413 | translational initiation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006479 | protein methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008213 | protein alkylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016570 | histone modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016571 | histone methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0016592 | mediator complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0018024 | obsolete histone lysine N-methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034968 | histone lysine methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0042393 | histone binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043414 | macromolecule methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0043531 | ADP binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043687 | post-translational protein modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0050657 | nucleic acid transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0050658 | RNA transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051028 | mRNA transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051168 | nuclear export | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051169 | nuclear transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051236 | establishment of RNA localization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032446 | SCAPER_N | 370 | 471 |
| No external refs found! |