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  5. Spov3_chr6.00985

Spov3_chr6.00985 (EMB2728, RPE)


Aliases : EMB2728, RPE

Description : phosphopentose epimerase. EC_5.1 racemase or epimerase


Gene families : OG0009508 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.00985
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_1_14260.1 EMB2728, RPE phosphopentose epimerase. EC_5.1 racemase or epimerase 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004089 carbonate dehydratase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004618 phosphoglycerate kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005261 monoatomic cation channel activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006091 generation of precursor metabolites and energy IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009522 photosystem I IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009538 photosystem I reaction center IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0009654 photosystem II oxygen evolving complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010109 regulation of photosynthesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0010242 oxygen evolving activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015252 proton channel activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016860 intramolecular oxidoreductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032977 membrane insertase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042548 regulation of photosynthesis, light reaction IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042549 photosystem II stabilization IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051920 peroxiredoxin activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140597 protein carrier chaperone IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000056 Ribul_P_3_epim-like 64 259
No external refs found!